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MetaGraph: Search DNA Sequences
AAAGTTGTGTAGTGCGATCGGTGGATGCCTTGGCACCAAGAGCCGATGAAGGACGTTGTGACCTGCGATAAGCCCTGGGGAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGAGTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTGAAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCGAAAGCGGAGGAGGCTAAACCGTGTGTGTGTTCAAGCCGGCAGGTGTTGCATGTGCGGGGTTGTGGGGGCCTTGTGGTTCTGCTGCCGCAGGATTGGCCAGTGAGAAATGTTGCGTGAAGGTGAAGCGTCTGGGAAGGCGTACCGGAGTGGGTGAGAGTCCTGTAACTGTAAGCGTGGCACTGGTGTGGGGTTGCCCCGAGTAGCGTGGGACTCGTGGAATT
Select graph:
GnomAD (release 3.0)
Kingsford (2,652 RNA-Seq)
MetaSUB (k=41)
RefSeq (85k taxID; release 97; with coordinates)
SRA-Fungi
SRA-MetaGut
SRA-Metazoa (1,000 studies)
SRA-Microbe
SRA-Mouse (Mus Muculus)
Tara Oceans (genomes with coordinates)
Tara Oceans (scaffolds)
UHGG All
UHGG Catalogue
Minimum k-mer matches:
Search with alignment
Minimum bases covered by seeds: