List of Graphs

Index Input k Num k-mers Num labels Indexing mode API endpoint
GnomAD (release 3.0) N/A 41 29,015,017,946 29 ordinary /api/gnomad
MetaSUB 7.2 Tbp 19 84,689,932,948 4,220 ordinary /api/metasub19
RefSeq (33M taxID; release 97) 1.7 Tbp 31 626,753,663,468 32,881,348 ordinary /api/refseq33m
RefSeq (85k taxID; release 97) 1.7 Tbp 31 626,753,663,468 85,375 ordinary /api/refseq85
RefSeq (85k taxID; release 97; with coordinates) 1.7 Tbp 31 626,753,663,468 85,375 with k-mer positions /api/refseq85_coord
SRA-Fungi 160 Tbp 31 299,492,752,526 121,900 ordinary /api/sra_fungi
SRA-Metazoa (10k subset) 33.4 Tbp 31 644,618,432,518 10,000 ordinary /api/sra_metazoa10000
SRA-Microbe 221 Tbp 31 101,733,896,434 446,506 ordinary /api/sra_microbe
SRA-Mouse (Mus Muculus) 146.6 Tbp 31 139,978,792,470 57,938 ordinary /api/sra_mus_muculus
Tara Oceans (genomes with coordinates) 61.9 Gbp 31 26,511,636,608 34,815 with k-mer positions /api/tara_genomes_coord
Tara Oceans (genomes) 61.9 Gbp 31 26,511,636,608 6,414,647 ordinary /api/tara_genomes
Tara Oceans (scaffolds) 357 Gbp 31 121,058,940,696 318,205,057 ordinary /api/tara_assemblies
UHGG All 710 Gbp 31 33,120,094,297 286,997 ordinary /api/uhgg_all
UHGG Catalogue 11.2 Gbp 31 9,676,446,464 4,644 ordinary /api/uhgg