List of Graphs
|
Index
|
Input
|
k
|
Num k-mers
|
Num labels
|
Indexing mode
|
API endpoint
|
| GnomAD (release 3.0) |
N/A |
41 |
29,015,017,946 |
29 |
ordinary |
/api/gnomad |
| MetaSUB |
7.2 Tbp |
19 |
84,689,932,948 |
4,220 |
ordinary |
/api/metasub19 |
| RefSeq (33M taxID; release 97) |
1.7 Tbp |
31 |
626,753,663,468 |
32,881,348 |
ordinary |
/api/refseq33m |
| RefSeq (85k taxID; release 97) |
1.7 Tbp |
31 |
626,753,663,468 |
85,375 |
ordinary |
/api/refseq85 |
| RefSeq (85k taxID; release 97; with coordinates) |
1.7 Tbp |
31 |
626,753,663,468 |
85,375 |
with k-mer positions |
/api/refseq85_coord |
| SRA-Fungi |
160 Tbp |
31 |
299,492,752,526 |
121,900 |
ordinary |
/api/sra_fungi |
| SRA-Metazoa (10k subset) |
33.4 Tbp |
31 |
644,618,432,518 |
10,000 |
ordinary |
/api/sra_metazoa10000 |
| SRA-Microbe |
221 Tbp |
31 |
101,733,896,434 |
446,506 |
ordinary |
/api/sra_microbe |
| SRA-Mouse (Mus Muculus) |
146.6 Tbp |
31 |
139,978,792,470 |
57,938 |
ordinary |
/api/sra_mus_muculus |
| Tara Oceans (genomes with coordinates) |
61.9 Gbp |
31 |
26,511,636,608 |
34,815 |
with k-mer positions |
/api/tara_genomes_coord |
| Tara Oceans (genomes) |
61.9 Gbp |
31 |
26,511,636,608 |
6,414,647 |
ordinary |
/api/tara_genomes |
| Tara Oceans (scaffolds) |
357 Gbp |
31 |
121,058,940,696 |
318,205,057 |
ordinary |
/api/tara_assemblies |
| UHGG All |
710 Gbp |
31 |
33,120,094,297 |
286,997 |
ordinary |
/api/uhgg_all |
| UHGG Catalogue |
11.2 Gbp |
31 |
9,676,446,464 |
4,644 |
ordinary |
/api/uhgg |